rs235987668 SNP Detail

Summary

• ID
  rs235987668
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135875269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTCC CCCGCCCCCC GCGGGCCCTG
  R
  GGGCCGCTCG CAGGTGTTCG CTGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321354271	CHEV_4_135703873	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235987668					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135875269 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15099	CpG island 15099	within coordinates
Gm68296	predicted gene, 68296	424 bp downstream
Rr377254	regulatory region 377254	265 bp downstream
Rr602287	regulatory region 602287	761 bp distal
Rr602288	regulatory region 602288	within coordinates
Rr602289	regulatory region 602289	1855 bp proximal
Rr602290	regulatory region 602290	1959 bp proximal
Tssr39669	transcription start site region 39669	710 bp downstream