rs236116705 SNP Detail

Summary

• ID
  rs236116705
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34485444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTACGGT CACAGCTGCA
  GGAGCTTGAG CAGCTGGTCA CATGGCATCC AATCAGGAAG CAGAGGTGTG GTTGCTGTTG
  CTTGGTTTGC TTATCCAGAC CACGGGGTGG TATTGCTCAC ATACAGGTTA GGTGGAAGAC
  CTTCGCAATT AAGACCAGCC CAGTTAACCT AATCCAGAAA CCCCATCACA TGGCTCGTAT
  Y
  TGTTTCCATG GTGACTCTAA ATCCTGCCAG GTTGACAGTC AAGATCAACC ACTATAAGAA
  CTCACACTGA GCAGTGCCTT CTGGAAGATT CCTTCTAAAG GTGCAGAGTT AAGTAGCCTC
  CTGTTCTTCC ATGACACCCT TGTTTTCCAA AAGCAACAAA AGTTTTGTTG CTTTTGTTTA
  CTCAGTGTTG GTGTGTGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701741	CHEV_3_34330217	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236116705					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34485444 () rs orientation: forward

Symbol	Name	Function Class
Gm20515	predicted gene 20515	within coordinates
Rr575127	regulatory region 575127	1368 bp proximal