rs236131793 SNP Detail

Summary

• ID
  rs236131793
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6004845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTTTTTC AAATTATATT
  TCCTCAGAAA TACTTTTGAA GTTAAAAATA TGACGCATCT ATCTCTTTAA AAAACATCAC
  ACACAAACTC ACACACACTC AAACACAAAT ACACACACAC ACACACACAC TAGTTTATCT
  ACAATCTGTG CTGCCCTAAT CTATCTAAAC TTTGTTTGCA TCAAACCAGT TACTTTTACG
  M
  GTCAAGGAAA TGCAAATAAT GGAAGTTACA GTCACTCCCC TAACACGTCG GTGCATTCGG
  TTTCAGTTTA AGAACTGTGG GTTTGCACTG ATTCTCGCCG CTCTAATCTC AGCCCATGTA
  CTGTGGGCAT CTCGCATTCA CAAGCAGCAC ACATTGGCAG TTCTCGCTGA TAACTTGGAG
  CGGATTCCCT ACAGATGAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321730884	CHEV_6_5954845	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236131793					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6004845 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17134	CpG island 17134	815 bp proximal
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	Intron
Rr407096	regulatory region 407096	1150 bp proximal
Rr626192	regulatory region 626192	within coordinates
Rr626193	regulatory region 626193	973 bp proximal