rs236231326 SNP Detail

Summary

• ID
  rs236231326
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58411952 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATATATT CTAATATACA
  GATCTTGTTT GAAGCGGGTA GGGTAGACCT GGGAGAATTT AGGAAAGAAA TGGGGAGAAT
  ATGACCAAAG TACACATGCA CAAAATTCCC ATAGAATTAA TAAAAATTGT ACATTAAAAA
  GAAAAAAAGT GATTAGTATC ATAAAACTAT TTCATTTGTT GTGGTGGTGG TTTGAGACTG
  A
  GTCTCTGCAT ACCAATGGGT GTCCTGGAGC TCTCTAGGAA GACCAGGCTG GCCTTAAGTT
  TCACAGAGAT TCACCTACCC CTGCCTCCAA AGGGGTGGGA TTAAGATGTG TGCCACCATT
  GTAAAACTAC TTTTAAAGAA CAAAAGATTT TAATAAAGTG ATTCTGCTCT TTTAAAAACA
  AACAAAAAAC CTTCATATTT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320783071	CHEV_3_58308453	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236231326					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58411952 () rs orientation: forward

Symbol	Name	Function Class
Gm66340	predicted gene, 66340	1182 bp upstream
Rr375034	regulatory region 375034	within coordinates
Rr577238	regulatory region 577238	591 bp distal