rs236243068 SNP Detail

Summary

• ID
  rs236243068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44381288 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTATTCTCC CTGGTTTATG
  GAAGGCAAAT GAATATTCAG TGTTCTGTAG AAGATACAGA GATCCTTTAC AAATATTTAA
  ATTCTGTTCT AAATTTTTAT TTTTTTGTGT GATATGGTGT GTGTGTGTGT GTGTGTGTGT
  GTAAGAGTTG GGTTCTCTGG GACTGGAGTT ATAGATATTT GTAGCTGCCA TGTGGGTTCT
  R
  GGAATTGAAC TCAGGTCCAG CAGGGGTTAC ATAGTGAGAC TCTGTATCAA ACATAAATGT
  ATATAAATAA ATCAATAGAA AACAGAGCTG TACACATGGT TCAGTGGGTT AAGAGTGCTT
  GCTGCACTTT CAGAAGACCC GAGTTCAATT CCCAGCACCC ACATGAGGCA GCTCACAATC
  ACCTGTAACT TCAGCTCCGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100990	CHEV_4_44394160	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236243068					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44381288 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	524 bp distal
Gm12455	predicted gene 12455	1634 bp upstream
Gm68903	predicted gene, 68903	within coordinates
Rr89080	regulatory region 89080	513 bp proximal