rs236247599 SNP Detail

Summary

• ID
  rs236247599
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183968402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAT GGGGGAGGTC AGCATGTCTG
  Y
  AGCCAGCCCT GGAGTCACAT AGATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320166651	CHEV_1_186060084	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236247599					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183968402 () rs orientation: forward

Symbol	Name	Function Class
Gm53486	predicted gene, 53486	1732 bp downstream
Rr425189	regulatory region 425189	93 bp distal
Rr425190	regulatory region 425190	396 bp distal