rs236265730 SNP Detail

Summary

• ID
  rs236265730
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:24177377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCCTCAG AACTGGGCTT
  GCTCTGGTTA ACCAGAGCTC CCCCACCCCC ACTCAGAAAT AAGACCTCCT GAGGAACCTA
  GTGGAGGGCC TACCAGCCAA AGCCCTGCAT CTGAAGGGAG TAAAAAGCCC ATAATTACTC
  CTTGTTTAGG TCGGCGCTCA GGAGGGTTTA CATTCAAGAC CTCAGCTGGC TCACACAGCA
  Y
  ACCAGTCTAC GGAAAAATGA GCCTGCTCCT GGGTTCCAAT GTTGCTTGTC CAAGGGTTTT
  TGGTTTCACA GGCGTCTTCT GGGACTCAAC TTTGTGACTA CTGATTAGAG AGTGGGGTTC
  CTCAGTTGTG AGAGGTGTCT CAGCCCTGAG GTTTGGAAGT TGTACCTTTT GAGAAACACA
  GAGTGTAGGT CTCTGGAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323598007	CHEV_11_24127377	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236265730					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:24177377 () rs orientation: forward

Symbol	Name	Function Class
D11Mit152	DNA segment, Chr 11, Massachusetts Institute of Technology 152	972 bp distal
Gm33440	predicted gene, 33440	within coordinates
Gm71861	predicted gene, 71861	374 bp downstream
Rr385801	regulatory region 385801	within coordinates