rs236352005 SNP Detail

Summary

• ID
  rs236352005
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21573966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATAGTGTC CAGGCAGGCA
  TGGTGCAGGC AGAGCTGAGA GTTCTATATC TTCATCTCAA GGCTACTAGT GGAAGCTAGG
  GTGAGGGTCT TATGCCCACA CCCACAGTGA CACACCCACT CCAACAAGGC CACACCTCTA
  ATAGTGCCAC TCCCTGGGCC AAGCATATAC AAACCATGAC ACTCCCTTTA TGTAGGAAGG
  K
  CATGCACTAA GCACCTTGTG CAGTGGGTAC TCTTTTTACA TGACCAGATT ACGATACTAC
  TCAGGGCAGG GCACCTCACC AAGAGAGAAA AGAAAAAAAG CCGTTTTACT GTAGTGGTTC
  GAATGAGAAC ACAGACATCA GGTATTTGAA CCCCTGGTAC CCAGTTGGTG GCAATGGTTG
  GGGAATCTGG ACGGTGTGTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325752833	CHEV_19_21671092	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236352005					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21573966 () rs orientation: forward

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	711 bp downstream
Gm38486	predicted gene, 38486	400 bp upstream
Gm59243	predicted gene, 59243	within coordinates
Rr364167	regulatory region 364167	1436 bp proximal