rs236373354 SNP Detail

Summary

• ID
  rs236373354
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13265565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCCCCTT TGTACTTTAT
  CATAGGAAGA GACTGACAGC TGACTGCTTT AGAGGGAGGG AGGGGGAGGA GGGAGGGGAG
  GAGGGAGGGA GAAGGAGGAG GGAGGGGAGG AGGGAAGGAG ACTTTCAGTG GGCTGTGACA
  ACTGGTATTC CCTTCACTTC TTTTCTGCCC TGCCTCCTTG AGTGTCCTGG GCTACTTAGA
  Y
  GTCCGGCCAC ATTGTATCAC CACTGAAGTA GCAAGTCACC CAAGTGTGGC CTTGACACAT
  ACTAGAAGAA CCTGTCCATC TCTGGCTAAG AGTTAACCTC AACAAAAGGG TTGTTAGATG
  ATGTTAAATG TTGCTGATAA AACTGTTGGT GAGGGCTGGT GAGATGGCTC AGCGGTTAAG
  AGCACTGACT GTTCTTCCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505152	CHEV_8_13215565	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236373354					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13265565 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	1485 bp upstream
Rr368495	regulatory region 368495	1729 bp downstream
Rr368496	regulatory region 368496	1392 bp downstream
Rr659888	regulatory region 659888	1042 bp distal
Rr659889	regulatory region 659889	1441 bp distal
Rr659890	regulatory region 659890	906 bp proximal