rs236382890 SNP Detail

Summary

• ID
  rs236382890
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:42066491 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTTGAAT GCCTTTCTAA
  ATAATAGATT CAAAGTGCGT ATATAGGGCA AAGGCAGCTA TGAACTCTGG AAAAGCCAGT
  GATAATTTGC TGTGGACGTG TAACATAGTT TCCCATCGGC AAGTGGAGAA GAAGTTCATT
  TTCTCTGTAG TTCCAGCTTT CTTTCCATTG AGAGAATAAC AGTGCTTTAA CCCACAATGG
  R
  GAATGGATGG AAGCTGCCAT TTTTCCTAGT ATAAGCACAG CAACTTAATT TGCAAGCTAA
  TACTCGGGTG CCCAGCGTTG TTCTGTATCA CATAGGGAAT CTCTTTTGGG GAATCTTTTA
  AAGTGTCTGT CCAGATGCTC TCCTCTTATG TCTTAAAAGA CCACAGGTTC CCCAGTGGAG
  AAGCTAGAGA AAGCACCCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325596262	CHEV_18_42093080	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236382890					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:42066491 () rs orientation: forward

Symbol	Name	Function Class
D18Mit104	DNA segment, Chr 18, Massachusetts Institute of Technology 104	759 bp distal
Prelid2	PRELI domain containing 2	Intron