rs236469333 SNP Detail

Summary

• ID
  rs236469333
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107649851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGACTGG AGATGGGTAA
  GCAATGAACA CTCAGAAAAT GGAGCAAGAA ATGAATACTA AATGTAATGG TTCTTCCTGG
  GTGTCAACTT GACTACATCT GAAATGAACT ACAATCCAGA ATTGGAGGGC TCACCTGTGA
  TCCGGAAGAC ACAAGTTTCT GACCTGGATC TTGGCATGGA GATCTTGAGG CACAGTAGCC
  W
  TGGAAGGTTT AGGCCCAGGT GAGGGTACAC ACCTTTAATC CCAGGAGACT AAGGCAAGGG
  GATCTCTGAG TTCAAGGTCA GGCTGGGACA AAGCAAGTCC CAGATCCAGA CGTGGTGGTA
  CACACCTTTA ATCTGGGCCA CACCTTCTGC TGGAGACCTA CATAAGGACA TTGGAGGAAA
  GAAGATTCGC TCTTCTTTGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321251332	CHEV_4_107465259	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236469333					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107649851 () rs orientation: forward

Symbol	Name	Function Class
Gm69341	predicted gene, 69341	within coordinates
Lrp8os3	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 3	495 bp downstream