rs236485761 SNP Detail

Summary

• ID
  rs236485761
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103977636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    catacttgt gcagcaagca ctgtaatcat
  ggagtcaccA GTCTGGGTTA TAATACAAAA TTTAAGCAAA GAGCAGAAGA TATGTTGCAG
  TTTTATAGAT AAAACTTAAG TCTTGTAGAG TATATCTATA ATAAATTAAA ATGAGTTGTT
  K
  TACGTATTTG AAAAAGAAAT GTTTTAATTT TTTTATTCTG GAGTTACtta taattttaat
  ttaaataaat CAGCTTGGCA CTGGCATGGA GTCACTGGCT GACTTTGCTA CAAGAAGGCC
  TCACTAGCTA GCTTTCCTCC TAAGCCTGAC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323163287	CHEV_9_104002767	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236485761					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103977636 () rs orientation: forward

Symbol	Name	Function Class
Acad11	acyl-Coenzyme A dehydrogenase family, member 11	within coordinates
Ackr4	atypical chemokine receptor 4	within coordinates
Gm47000	predicted gene, 47000	698 bp upstream
Rr686042	regulatory region 686042	1861 bp distal
Rr686043	regulatory region 686043	1818 bp proximal
Tssr91231	transcription start site region 91231	1879 bp downstream
Tssr91232	transcription start site region 91232	1905 bp downstream
Tssr91233	transcription start site region 91233	1991 bp downstream