rs236630969 SNP Detail

Summary

• ID
  rs236630969
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108699357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGACACCC TTGCTTTTTG
  CCTGCTTGCT TTTGCCCTTC CTAGCAAGTC AATTCCTTCA CTGACATTAG AGCCTACTTC
  TTCAGGACTC TGGCACATAC TGAAGACCAA CTGAACAACT ACTGGATTGG TAGACTTCTG
  TTTTACAGCC AGTCATTGTT GGGTTTGCTG GACCACAGCC TATAAGCCAT TCCAATAAAT
  M
  TCTCTGATCT CTCTCTTCCT CTAATACTTC ACTCAATCTA TCTATCTATC TATCTATCTA
  TCTATCTATC TATCTATCTA TCTATCTATC TATCTATCCA TCTATCCATC CATCCATCCA
  TCCATCCATC CATCCATCCA TCCATCCATC CATCGAGAGC TAACCCAATC TGTAAGTTGT
  GTTACGCTAG AGAACCCTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320866896	CHEV_3_108594959	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236630969					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108699357 () rs orientation: forward

Symbol	Name	Function Class
Rr583316	regulatory region 583316	325 bp distal
Stxbp3	syntaxin binding protein 3	1139 bp downstream