rs236631615 SNP Detail

Summary

• ID
  rs236631615
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:110010124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATTTGCAA ATTTAGATAC
  AGTCGCAGCA GGAATATGAA CTGGGCACTC GACAAGCATG GGGGTGGGTG GTTTTCTTTG
  TCTCCTCCCA TCTCATTCAG AAAGCCAGCT TCCCACTGTA TTGATAGATG TCTAGGGAAA
  TGAACAGAAA GGGGGAGGGA GATGTTAGAC AGCAGCCCAT CCCCCCACAT CCACCCCAAA
  Y
  CAGAGGCCAG GCTCATTATG GCTGAATAGG GCAAAGGATA GAAACAAGTT TGAACAGCAA
  TGTAAACATA TACAGACAGA GGCCTCAGGA TACCCTGAAA ACCCCTCTGA AGCAGCCTAG
  GTTCCCCATG GATTCCTCCC TCTTAGAAAG CAGCTGATCT GAACACCACT ATTCTGATAG
  TATGTCCCTC TGTTATTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321255190	CHEV_4_109825532	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236631615					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:110010124 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14586	CpG island 14586	142 bp distal
Gm33070	predicted gene, 33070	within coordinates
Rr84118	regulatory region 84118	524 bp distal
Tssr38368	transcription start site region 38368	253 bp downstream