rs236658225 SNP Detail

Summary

• ID
  rs236658225
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116152081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAAGCTGT AATGCCTTTG
  AAGTTGTTCT AGTGGGGAGA GTATCTGGAA CTATAGGAGG TTGAGGAGAG AGTTATTGGA
  GACCACGAAC GCACGCCCAT ATCTTTTGTG ACACACTTCA AAAATGTGTA GATGTTCCTA
  AGAAAAATGC ACAAGATATC CTAAGAACTG TTTGTGAAGA AGCTGAGGCA GGATGGTCAC
  R
  AGTTTGAGGA CAGACTTGAT TATGTAGCAA GTTCTCGGCC ATCCTGGATG AGAAAGAGAG
  AGACAGAGAC GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAAAGAAA GGAAGGAAGG AAGGAAGGAA GGAAGGAAGG AAGGAAGGAA
  GGAAGGAAGG AAGAGAAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323487256	CHEV_10_115753232	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236658225					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116152081 () rs orientation: forward

Symbol	Name	Function Class
Ptprb	protein tyrosine phosphatase receptor type B	within coordinates
Tssr95861	transcription start site region 95861	1100 bp downstream