rs236701560 SNP Detail

Summary

• ID
  rs236701560
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129955923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTGGTCCT GTAAAGGTTT
  GATGCCCCAG CATAGGGGAA TGCCGGGGCA GTGAGGTGGG AGTAGGTGGG TGGAAGGGAG
  AGTACCCTGA TAGATACGGG AAGGGGGATG GAATAGAGGG GTTCCAGAGG GGAAACTGGG
  AAAGGGGATA ACATTTAAAA TGTAAATATA TAGCATATCA AATAAAGAAA CTATTTAAAT
  S
  AAATCAGTAA TTCTGTAAGA TCATTTATCC ATTTAAATAA TATTAATTTA TGAAAGTTTA
  TCTTCATATT GATATCCAGG AAAATTTCCT AATAGAGTGG AAGCAATCAC AGCTCTCTGA
  TCCTTGCTGT TCCAGAGACA GCTGCATCTT TTCATGCAGT GCCAGCCTCA TCCTATAGAA
  AACAATGGTT AAGGTCTGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323544190	CHEV_10_129557110	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236701560					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129955923 () rs orientation: forward

Symbol	Name	Function Class
Gm5181	predicted gene 5181	185 bp upstream
Rr385500	regulatory region 385500	1901 bp downstream