rs236720085 SNP Detail

Summary

• ID
  rs236720085
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61900976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGGATGGC CCTTCAAGCT
  GTCTCTTACT AAGGCAAAGG AGGTGAACCT CTTTATCTGG CATCTGAGAA TTGATGTCGG
  CAAAGTGGAG AAGATCCCCA CTACACAGCT GCCTCCAGTG TCACAGAATA CAGCTGTGAG
  CTCCTGGCAG CCATAAGTGC CCTCACTCCT CCAGGAGATA GATGCATGTG CCACCCGCAG
  W
  CTGTGGTCCC CTTTCAGGGG ATGGGCGTGT GGAAATCTCC AAGAGCTGGA CAGAGTACTC
  TATACAGAAT GGAGGGGGTC TAAAACTTAG TGGGGCACAG ATAGAACCTG AGAAGGAGAG
  GCAGGGAGAG TCTTGAGACG AGGGGAAGTT GCTCCCCACA ACCCCAGAAC CTTAGAACCA
  GGTGGTAAAG TGCGGCCTCG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330694	CHEV_10_61527945	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236720085					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61900976 () rs orientation: forward

Symbol	Name	Function Class
D10Mit149	DNA segment, Chr 10, Massachusetts Institute of Technology 149	1931 bp proximal
Tssr93687	transcription start site region 93687	1418 bp upstream