rs236797816 SNP Detail

Summary

• ID
  rs236797816
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:37919217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGCTGCCTG GCCTGGGCTT CTGAGAAGAT
  GCCAGTTCTA GCTTCAGGAA GCTGCTCCTT CCTCACCTGA GAACCTGCCT GGCCCTGTGC
  CCTCTGCCCA AACAGGAGAA GCAGCCTGAA CTAGTTTGTG TGGCTGACAG AGGCCATGGA
  R
  GGAAAGGGCT TCCCAATGCC CCCTAGCCTG TCACTGCCAT GCAGAAAGGG TCACAGGCAG
  CTCCTGGGTA CTCCATACTG AGACCCCTCC AGCAGTCTCT GAAGGGTGGC CACGAGTCTG
  TCAACCGCAG GCTTTGGGAT ATGGAGAATC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322180558	CHEV_7_39004812	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236797816					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:37919217 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18905	CpG island 18905	1663 bp proximal
Plekhf1	pleckstrin homology domain containing, family F (with FYVE domain) member 1	861 bp downstream
Rr645765	regulatory region 645765	1591 bp distal