rs236801429 SNP Detail

Summary

• ID
  rs236801429
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:116151955 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGTTAGGT AGATGCCAAG
  GTTAGTACCA AGATAAACAA TGTCAGAGCC CTGGAGGAAC TTACATTCAA ATGCTCCTAA
  TTTATATAAT GTGTTGAGCG TCTCATTGTG AGTTATCTAA TTTTATAGTA AGCTGTAATG
  CCTTTGAAGT TGTTCTAGTG GGGAGAGTAT CTGGAACTAT AGGAGGTTGA GGAGAGAGTT
  R
  TTGGAGACCA CGAACGCACG CCCATATCTT TTGTGACACA CTTCAAAAAT GTGTAGATGT
  TCCTAAGAAA AATGCACAAG ATATCCTAAG AACTGTTTGT GAAGAAGCTG AGGCAGGATG
  GTCACAAGTT TGAGGACAGA CTTGATTATG TAGCAAGTTC TCGGCCATCC TGGATGAGAA
  AGAGAGAGAC AGAGACGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323487253	CHEV_10_115753106	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236801429					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116151955 () rs orientation: forward

Symbol	Name	Function Class
Ptprb	protein tyrosine phosphatase receptor type B	Intron
Tssr95861	transcription start site region 95861	974 bp downstream