rs236807787 SNP Detail

Summary

• ID
  rs236807787
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127922624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCTTAGG AGACATGGCG
  CCCTCTTTTG GCTTCCATGG GTACCTGCAT ATACAGTAAA CATGGTCTGG GGCGCGGAGA
  TGTACAAAAA TCATGTGCTA GGTGAAATGG CACTTACCTT TAATCCCAAC ACTTAGAAGG
  CAGGGGCAGG TGGATCTCTG AGATTGAGGC CAACCTGCTC TATGTAGAGT TCCAGGACAG
  M
  CAGTGTTGCT TCTTGAGGTC CTGAGTTTGA TTCCCAGCAA CTACATGGTG GCTCAAAGCC
  ATCTGTTATG GGATCTTCTG GCATGAAGGT ATATATACAG ATTGAGCACT CATGTATAAA
  ATAAAAAATA AATTTAAAAA GATTATGTAT TTGTATGCTA GATTGTAAAG GTTAAGTTAG
  AAACAAATGC TCATTAGCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323531644	CHEV_10_127523811	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236807787					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127922624 () rs orientation: forward

Symbol	Name	Function Class
Atp5f1b	ATP synthase F1 subunit beta	within coordinates
Gm55458	predicted gene, 55458	1395 bp downstream
Mir677	microRNA 677	1392 bp downstream
Rr441098	regulatory region 441098	66 bp distal
Rr441099	regulatory region 441099	165 bp distal
Tssr96322	transcription start site region 96322	1227 bp downstream
Tssr96323	transcription start site region 96323	658 bp downstream
Tssr96324	transcription start site region 96324	588 bp downstream
Tssr96325	transcription start site region 96325	449 bp downstream
Tssr96326	transcription start site region 96326	433 bp downstream
Tssr96327	transcription start site region 96327	406 bp downstream
Tssr96328	transcription start site region 96328	366 bp downstream
Tssr96329	transcription start site region 96329	1558 bp upstream
Tssr96330	transcription start site region 96330	1618 bp upstream