rs236832900 SNP Detail

Summary

• ID
  rs236832900
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45174581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGAG CCACAGTCTG TCTGTTTCTA
  R
  CCACCCTCTA GAGGGGCGTG GGGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322942715	CHEV_9_45071366	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236832900					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45174581 () rs orientation: forward

Symbol	Name	Function Class
Gm20612	predicted gene 20612	1993 bp downstream
Il10ra	interleukin 10 receptor, alpha	within coordinates
Rr677873	regulatory region 677873	1484 bp distal
Tssr84758	transcription start site region 84758	1599 bp upstream
Tssr89253	transcription start site region 89253	344 bp upstream
Tssr89254	transcription start site region 89254	275 bp upstream
Tssr89255	transcription start site region 89255	215 bp upstream
Tssr89256	transcription start site region 89256	184 bp upstream
Tssr89257	transcription start site region 89257	893 bp downstream
Tssr89258	transcription start site region 89258	934 bp downstream
Tssr89259	transcription start site region 89259	957 bp downstream