rs236854813 SNP Detail

Summary

• ID
  rs236854813
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9164450 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agaggtcca cctgcctctg cctgccaagt
  gctaggatca aagctgtgcg ccaccacggc cCTTGAGCAC AGCATTGAAG GTCTTTTTGG
  GTTAGGGGtt tgaagacaag gtgtcactct gtagacagac tggtctaacc gatgattctc
  Y
  tgcctcagct tcccacgtgc tgctgggatt atagttgtaa gccatcatag atggctTTTG
  GAGAAATTCC TTGATCCTCT TGGCTTTGTA CCTCTGGACC CCATAATGTG GACACTGAGC
  TTTACAAGCT GGTTTGCTAA GCAGTTAATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320649747	CHEV_3_9099390	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236854813					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9164450 () rs orientation: forward

Symbol	Name	Function Class
Rr374480	regulatory region 374480	1529 bp upstream
Rr573385	regulatory region 573385	1408 bp proximal
Rr573386	regulatory region 573386	1861 bp proximal