rs236907226 SNP Detail

Summary

• ID
  rs236907226
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:16859023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCC CCCCCCCTTA AGATGGTATC
  T
  GACCCCTAGA AATGTAAAAT CTAGT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323920159	CHEV_12_16815828	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236907226					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:16859023 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4441	CpG island 4441	1572 bp proximal
E2f6	E2F transcription factor 6	1909 bp upstream
Rr463369	regulatory region 463369	605 bp distal
Rr463370	regulatory region 463370	1469 bp proximal
Rr463371	regulatory region 463371	1966 bp proximal
Tssr112858	transcription start site region 112858	1918 bp upstream
Tssr112859	transcription start site region 112859	1957 bp upstream