rs236982490 SNP Detail

Summary

• ID
  rs236982490
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65432362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTAGGATG AGGACCCAAC
  ATATTTGCAA AGTTTCTATT TTTTTTTTTT TCTGTTTACG ATTATTTGAG CATATATCTT
  TTGGGACTGC TTTCTTTCCT GCTAGAGGCC TTCAGTAGGT TATAGTGAAA GACCTACAAC
  ATGAGGACTC CCCCACCTTC TGACTCAGGA GAGGCGACTT GCCAAGTCAC TCACGAGAAA
  Y
  GGCCTTGATG CAAATTGCAA GAGGACTTTT TATTCCAAGA GCACTCTGGG GCCCACAGTC
  ATACACCACG CATGGGTAGA GGACTGTGGC TCCCCAATAG CTGGGTAAGG GGGTTTTTAA
  AGGAAGAAAC CACAACTCAA GGGGGTGGGG AGGACATTGT TGGAAAATAC CAAAAATACC
  AGTTAAGAGT CATGAGGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324073120	CHEV_12_66486575	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236982490					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65432362 () rs orientation: forward

Symbol	Name	Function Class
Rr260997	regulatory region 260997	within coordinates
Rr267826	regulatory region 267826	240 bp proximal
Rr387347	regulatory region 387347	within coordinates