rs236999150 SNP Detail

Summary

• ID
  rs236999150
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:35748412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCAAGCAA AATACATTAA
  CCAGTAAAAT AAGAGAAGCT CATTTTTCAA AGGAGATGGG AATGGGTCTT ATCGAAGCGT
  GGTTAACAGA AAGAGTGCAG GAGCAACCAG TTGAACACTA GTGTTCTTAT TCTGTCTGCC
  ATACTCTGCT CCCAGCACTA TGTATGAGTG GAGGAGGATG TTCAAGATTA AACTCTGTGA
  K
  CACTGCTTTG TGCTTGTCCT TGGATGATTA GCATTATGAA GATCAGCTGC CTTTGCTGTG
  TGTGCAGGAA TGCAGGGTCA ATGTTCCTTC TTACAGATAA CACTTGCCGC ACACAAAAAT
  GTAACTAAGT GAGACTCCTG TGTTCTATTA GATAATAACC ATAGGGATAT TCTAGTCTCT
  GATCACTCAC ATAGTCCTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322901344	CHEV_9_35644701	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs236999150					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:35748412 () rs orientation: forward

Symbol	Name	Function Class
Gm36974	predicted gene, 36974	659 bp downstream
Pate5	prostate and testis expressed 5	1213 bp downstream