rs237019711 SNP Detail

Summary

• ID
  rs237019711
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96142429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTGAAGCA CATATCTTGT
  TTTTTTAAAC ATTATTCTTT TTGCTTTAAT AAGGAAATAA ATAATTTTTT AGCTGTAACA
  TTTTAATGGC TATGACAATA TTTTAAGTAA AGAAGTCTAA GGAACTCAGT GTGGGGAGGG
  AGGGGGAGTT GGAGAGGGGC AGAGCCTTCC TTTCAGTGAG GAAAGCCCTG ATGAGGAAAA
  W
  GAAGCAACAG ATGTTTCTTC TGTTACAATT GAAGTTGTTT CATTCAAAAT TCAACAGTAG
  CTGAAATGAG GAGAGAGAGG GGGGTCATAA ATCCGACCTA AATGGTGAAT AAATAAAACA
  GCCATTTATC ATTTATTTAA AATTCATCCT TTATAGTCAG GATTTGAGAA TCAACATAAC
  AAAAATGAGT ATACATTTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323107369	CHEV_9_96160795	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237019711					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96142429 () rs orientation: forward

Symbol	Name	Function Class
Tfdp2	transcription factor Dp 2	within coordinates
Tssr2975	transcription start site region 2975	1142 bp downstream
Tssr86589	transcription start site region 86589	1665 bp downstream
Tssr86590	transcription start site region 86590	1650 bp downstream
Tssr86591	transcription start site region 86591	1591 bp downstream
Tssr86592	transcription start site region 86592	1574 bp downstream
Tssr86593	transcription start site region 86593	1546 bp downstream
Tssr86594	transcription start site region 86594	1363 bp downstream
Tssr86595	transcription start site region 86595	1115 bp downstream
Tssr86596	transcription start site region 86596	1099 bp downstream