rs237061633 SNP Detail

Summary

• ID
  rs237061633
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74700246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTACTAAGT TCAAAttgtt ttcaccaggc
  tagtttttct ctgcatagcc ctagctgatc tgaactcact ctgcagacca ggctgtcctc
  atactcagag atccacctgc ctcagcctac cgaatggtgg ggttaaagaa gtgcacaacc
  R
  gtgcccagGC CTCATCAGGT TAGTTATATC GTTAATTATC ATAGCCTGTT TGAGAAAGCT
  CCTTTTGCCA TCCAGCTGAC TTTATAGTTC TCTAAATTTA ATAGATCCAG CGACATCTGA
  AACAGGGGGA TCTATTCTGC GTGGAGAGAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319795108	CHEV_1_74707661	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237061633					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74700246 () rs orientation: forward

Symbol	Name	Function Class
Cpgi388	CpG island 388	352 bp proximal
Gm70804	predicted gene, 70804	within coordinates
Rr371526	regulatory region 371526	within coordinates
Rr413230	regulatory region 413230	within coordinates
Rr413231	regulatory region 413231	308 bp proximal
Rr413232	regulatory region 413232	669 bp proximal
Rr413233	regulatory region 413233	711 bp proximal
Tssr7442	transcription start site region 7442	463 bp upstream
Tssr7443	transcription start site region 7443	546 bp upstream
Tssr7444	transcription start site region 7444	611 bp upstream
Tssr7445	transcription start site region 7445	627 bp upstream
Tssr7446	transcription start site region 7446	707 bp upstream
Tssr7447	transcription start site region 7447	1009 bp upstream
Ttll4	tubulin tyrosine ligase-like family, member 4	558 bp upstream