rs237072028 SNP Detail

Summary

• ID
  rs237072028
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141547305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAGGGTAG TTTTCCTCAT
  GACCCAAGTG ACATTGTCTA CATCACTGCC ATGGTTGGCC AGGATAAACG TCATTTAATT
  CTGTGTGTGT GTGTGTGTGT GTGTATGTGG ATGTCAGAAG TCAACCTGTA GTGCACTGGT
  TCTCAACCTT CCTAATGCTG TGACTCTTTA ATACATATAG TTCGTGTCCT GGTAACACCC
  M
  ACCATGAAAA TTATTTATTG CTACTTCATA ACTGTAATTT TGCTACTGTT ATGAATAATA
  ATGTAAATAT CTGATAAACA GGACATCTGA TATACAATCA CAGTGGGGTC ACGACCCACA
  GGTTGAGAAC CGCTTCTCTA GCCTCATCTA AGTTAGTTTT TAAGTTAGAG TCTATCCTTA
  GCTTAGGGCT CACCCAATTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321390089	CHEV_4_141375909	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237072028					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141547305 () rs orientation: forward

Symbol	Name	Function Class
Cela2a	chymotrypsin-like elastase family, member 2A	within coordinates
Cpgi15246	CpG island 15246	917 bp distal
D4Mit32	DNA segment, Chr 4, Massachusetts Institute of Technology 32	within coordinates
Gm56298	predicted gene, 56298	within coordinates
Tssr40108	transcription start site region 40108	950 bp downstream
Tssr40109	transcription start site region 40109	915 bp downstream
Tssr40110	transcription start site region 40110	892 bp downstream
Tssr40111	transcription start site region 40111	1331 bp upstream
Tssr40112	transcription start site region 40112	1359 bp upstream
Tssr40113	transcription start site region 40113	1388 bp upstream
Tssr40114	transcription start site region 40114	1710 bp upstream
Tssr40115	transcription start site region 40115	1744 bp upstream
Tssr40116	transcription start site region 40116	1784 bp upstream
Tssr44372	transcription start site region 44372	1995 bp upstream
Tssr44373	transcription start site region 44373	1708 bp upstream
Tssr44374	transcription start site region 44374	862 bp upstream
Tssr44375	transcription start site region 44375	629 bp upstream
Tssr44376	transcription start site region 44376	611 bp upstream
Tssr44377	transcription start site region 44377	2 bp upstream
Tssr44378	transcription start site region 44378	109 bp downstream
Tssr44379	transcription start site region 44379	1358 bp downstream
Tssr44380	transcription start site region 44380	1370 bp downstream
Tssr44381	transcription start site region 44381	1726 bp downstream
Tssr44382	transcription start site region 44382	1745 bp downstream
Tssr44383	transcription start site region 44383	1796 bp downstream