rs237085553 SNP Detail

Summary

• ID
  rs237085553
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62227092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGGTTCTA TAAGAAAGCA
  AGGTGAGCAA GCCAGGGGAA GCAAGCCAGA AGGCAGCACC CCTCCACGGC TTTTGCATCC
  ACTTCTGCCT CCAAGTTCCT ACCCTGTGCG AGTTCCTGTC CTGACTTCCT TTGGTGATGA
  ACAGCAATGT AGAAGTGTAA GCTGATTAAA CCAGTCCCTC CCCAACTTGC TTCTTGGTCA
  Y
  GATGTTTCAT GCAGGAACAG AAACCCTGAC TAAGACAGGT ACTCTCTTAT GGTCATTGCA
  GCACTATTTA CAATAGTGTC CACCCCTGAT GACTGTAATT ATCTCTGTCT GTCTGTCTGT
  CTTTCTCTCA CAATCACCAG TCTTAGTCAA CCTTTAACAA AAGGCTGTTT TTCATTTGAG
  ACACCACGGG TGAACCTAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325648562	CHEV_18_62253675	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237085553					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62227092 () rs orientation: forward

Symbol	Name	Function Class
Gm41750	predicted gene, 41750	within coordinates
Rr354924	regulatory region 354924	910 bp proximal