rs237094495 SNP Detail

Summary

• ID
  rs237094495
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:141935785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA GCCAACAAGA AAGAAAGAAA
  R
  AAAAGACTCT GCTTGCACCT CAATC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322471183	CHEV_7_149567953	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237094495					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:141935785 () rs orientation: forward

Symbol	Name	Function Class
Ctsd	cathepsin D	Intron
Gm49369	predicted gene, 49369	Intron
Rr368483	regulatory region 368483	526 bp downstream
Rr658151	regulatory region 658151	485 bp distal
Tssr70137	transcription start site region 70137	1250 bp downstream
Tssr70138	transcription start site region 70138	1202 bp downstream
Tssr70139	transcription start site region 70139	1183 bp downstream
Tssr70140	transcription start site region 70140	1156 bp downstream
Tssr70141	transcription start site region 70141	1135 bp downstream
Tssr70142	transcription start site region 70142	1088 bp downstream
Tssr70143	transcription start site region 70143	576 bp upstream
Tssr70144	transcription start site region 70144	1378 bp upstream
Tssr75774	transcription start site region 75774	1239 bp upstream
Tssr75775	transcription start site region 75775	1234 bp upstream
Tssr75776	transcription start site region 75776	1213 bp upstream
Tssr75777	transcription start site region 75777	1162 bp upstream
Tssr75778	transcription start site region 75778	1149 bp upstream
Tssr75779	transcription start site region 75779	1114 bp upstream
Tssr75780	transcription start site region 75780	1098 bp upstream
Tssr75781	transcription start site region 75781	1080 bp upstream
Tssr75782	transcription start site region 75782	1052 bp upstream
Tssr75783	transcription start site region 75783	568 bp downstream
Tssr75784	transcription start site region 75784	1401 bp downstream
Tssr75785	transcription start site region 75785	1421 bp downstream
Tssr75786	transcription start site region 75786	1451 bp downstream