rs237126676 SNP Detail

Summary

• ID
  rs237126676
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:53224999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGCTCTCA GGTAAGGCAC
  TGTATGTCAT GTCTAAAGTC TGTCTCCTGA GAGCAGAGGA AGAGACTCTG ACATCTTCTT
  TGTTGCAGCT CTCAAATTTA TATTTGCAGT CCAGAGTTGA TGACCGCTTT TTATTTATTT
  CCTTGTCTTC CAGCTTAAGC AGCTCCATAC TGTCATGTAA GCAACTTGGC CCAAAGGTCC
  R
  TAAGTGGGAC ATAAAAGGCT TGCCCTTCCC TGTCATCTCC AAGCTATTCC TCAGCTCTTG
  CGGGTATGCA ATGCCACTGT GGTTGCGGGT ATCTGGGGCA GTAAGTTTGG ACAAAGATGA
  CCATTTCCTC AGGGGCCTGA AGTCCTTCAT GTCTAGGGAG GAGTCCCGCT CCCCTCTGCT
  GTGGTCTCCC AATGTCTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323304872	CHEV_10_53068709	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237126676					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:53224999 () rs orientation: forward

Symbol	Name	Function Class
Cep85l	centrosomal protein 85-like	within coordinates
Tssr97581	transcription start site region 97581	386 bp upstream
Tssr97582	transcription start site region 97582	265 bp upstream
Tssr97583	transcription start site region 97583	878 bp downstream
Tssr97584	transcription start site region 97584	912 bp downstream