rs237194513 SNP Detail

Summary

• ID
  rs237194513
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:91987510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATTCTCTGT AAACTGTCCC CCCTCCTTTT
  TGCACCTACT TTAAGACAGT TTGTGTGGGC AGTTGCTCAT GAAACACAGA TTGTATCTCT
  TAAGGTTCTT CACAGGCTTT CCTTGGTTCC GATGGCCCTG TCAGGACCTG TCAGGTCATG
  M
  CCTGCCCTCA TTCTCATGAG CAGACTTAAG AGGAAGACAG TGAGTAAGAC CTAGACAATG
  AACTACTGGC TATTCCTATC ACCTCATATC AAGGGCAGTT CTATAGCACA AACATGGTAT
  GTCTACTCAA AATATAAGTT GAAACCTGAC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319842247	CHEV_1_93956365	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237194513					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:91987510 () rs orientation: forward

Symbol	Name	Function Class
Hdac4	histone deacetylase 4	within coordinates
Rr18400	regulatory region 18400	891 bp proximal
Rr23700	regulatory region 23700	110 bp distal
Rr35319	regulatory region 35319	292 bp proximal
Rr366965	regulatory region 366965	849 bp downstream
Tssr8116	transcription start site region 8116	840 bp downstream
Tssr8117	transcription start site region 8117	811 bp downstream