rs237206994 SNP Detail

Summary

• ID
  rs237206994
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11684639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCAGCCTT TTCGCCTCTA
  AGAGCTTTCC GTAATAGTTG GAACGGGTTA ACAAGATGGT TCCGTATCTT AAGACCATCC
  AGGTTTCAGA TAGGAAAGCT CAGAACTACA ACGTCCTCGC CTCCGCTACA ATACTGGTCT
  CCAAAGTCAA GTCTACAACT CGTTCTCCGT AGACGTGAAA ATGCTCCTTT AGCTTTAGAT
  Y
  AAATTCTGGT AAACAGTACA GCGTGAATTT TGCCGCTTTA TGGCGCAGAA GCACTTCTGT
  GTGCAGGTTA ACTAAGGCGA CCACGAGAAG GTGGATTCCC AGCGACTACC TGCACCCAAC
  TGCATGCCAC CTTTCAACAC CAGGAGAACG GGGCCAATTA GCGCAGCTTA CACAGGACGG
  TCCCGGTGGA GAGGGGGCCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322492720	CHEV_8_11634639	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237206994					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11684639 () rs orientation: forward

Symbol	Name	Function Class
Ankrd10	ankyrin repeat domain 10	within coordinates
Cpgi20087	CpG island 20087	within coordinates
Gm64331	predicted gene, 64331	731 bp upstream
Mir7238	microRNA 7238	1055 bp downstream
Rr186041	regulatory region 186041	within coordinates
Rr400761	regulatory region 400761	1079 bp upstream
Tssr80389	transcription start site region 80389	387 bp downstream
Tssr80390	transcription start site region 80390	413 bp downstream
Tssr80391	transcription start site region 80391	1002 bp downstream
Tssr80392	transcription start site region 80392	1054 bp downstream
Tssr80393	transcription start site region 80393	1090 bp downstream
Tssr80394	transcription start site region 80394	1106 bp downstream