rs237220485 SNP Detail

Summary

• ID
  rs237220485
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13822217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATAGTGTGG CTTTTGGCCT
  TGAGTATCTA GAGGGTAAGC AGTGTGGAGG AGAAAACAGT ACACTGCATC AGGCTCTACC
  AAAGTGTAAG CACAGCGTTG TTTGTGTTCT AAGACTTAGG TTATCGGGGC TGGAGAGACA
  GCTCACAGAG GAGCTTTTGC TGCCTTTGCA GAGGACCAGG ATCTTGTTCT AGCATCTTCA
  Y
  CGTGGCTCAC AGCAGTTATA ACTCAAGTTC AAGAGGACCC CATGCCCTCT TCTGACCTCT
  GTTGGCACAC ACATACATTT AGGCAAAACA ATTAGGGACA TAAAATAAAT CTTTAAAGTT
  TTTTTCAGTT ATGTTGTATA AATATTATAA AGAGGGTTTA TAACCTCAAA AAAATGAAGA
  ATTGTTATTT TACGTGTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322509746	CHEV_8_13772217	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237220485					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13822217 () rs orientation: forward

Symbol	Name	Function Class
Cdc16	CDC16 cell division cycle 16	within coordinates
Gm46032	predicted gene, 46032	within coordinates
Tssr76425	transcription start site region 76425	828 bp downstream