rs237307492 SNP Detail

Summary

• ID
  rs237307492
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48655279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATTGCATG CTCAGTCAGG
  AAGCTAAGAG ATACACGCAG CCTCTGGGTT CTCTTTGTCC TTTTGATATA GCTAGGGATT
  TTGGCCCACG GAATGTTACT GCCCATAGGT CAGGGTGGAT CTTCTTACAC CAAAGAACTG
  AGTCCAGATA GTCTCTCATT CATGTTCCTA TAGGCTAACC TGACCTAGAA AATCCCTCAC
  R
  GGCAAGCTCA TAGGTTTGCC CCTAGATGAT TCTAGAGCCC GTCAGGGAGT CAGTCATTAA
  CCATCTTGCA CACGCATGAG ATATTCTGTT TCAAACAAAA AGTGGAAGGT ACCCAAGGAC
  CAGAACTTAT CCTAATGACC ATGCACACGC TATGCTCCCT GCACTCCTGG AACTGCTTCC
  AAGCAAGTGG CTGTCTCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325408119	CHEV_17_48487576	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237307492					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48655279 () rs orientation: forward

Symbol	Name	Function Class
Rr335234	regulatory region 335234	1278 bp distal
Trem2	triggering receptor expressed on myeloid cells 2	within coordinates
Tssr145093	transcription start site region 145093	1834 bp downstream
Tssr145094	transcription start site region 145094	1806 bp downstream
Tssr145095	transcription start site region 145095	1758 bp downstream
Tssr145096	transcription start site region 145096	1725 bp downstream
Tssr145097	transcription start site region 145097	720 bp downstream
Tssr145098	transcription start site region 145098	378 bp downstream
Tssr145099	transcription start site region 145099	229 bp upstream
Tssr145100	transcription start site region 145100	258 bp upstream
Tssr145101	transcription start site region 145101	295 bp upstream
Tssr145102	transcription start site region 145102	394 bp upstream
Tssr148525	transcription start site region 148525	439 bp downstream