rs237332549 SNP Detail

Summary

• ID
  rs237332549
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75294000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAGGTTTA TCCCATTTGA CTGTATGAAG
  GCTTCGACAG ACAGAGCACC CTTACTTGCA CTAGGGATGA GTAAGCTCTT GACTCAGCAT
  ATCTGCTATA CATGCTGGGG CACAACCAGA GCATCCCGGG GTGTGTGTGT GTGTGTGTGC
  R
  CACAGAGTAC ACCATCACTG GACATACCCG GTGGGAACTT TCCTTCTAAA GAGTCAAACA
  GGAGCCGTGC CTGCTGGCCA TCTTTATTTT TCTTTTTCCT TCAAAGAGGA TAACCAAAGA
  TACAGACAGG ATTCAGCAAA ATAAAACAGA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323008199	CHEV_9_75234525	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237332549					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75294000 () rs orientation: forward

Symbol	Name	Function Class
Gm67678	predicted gene, 67678	928 bp downstream
Mapk6	mitogen-activated protein kinase 6	64 bp downstream
Rr683127	regulatory region 683127	1697 bp distal
Tssr90534	transcription start site region 90534	508 bp downstream
Tssr90535	transcription start site region 90535	750 bp downstream
Tssr90536	transcription start site region 90536	1169 bp downstream
Tssr90537	transcription start site region 90537	1241 bp downstream
Tssr90538	transcription start site region 90538	1272 bp downstream