rs237365193 SNP Detail

Summary

• ID
  rs237365193
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127764588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCTTCTT CTTCTTCTTC
  CTCTTCCTCT TCCTCTTCCT CCTCCTCCTC CTCCTCCTCC TCCTGCTCCT CTAAGATTGA
  TTTGTTTATT TTATTTATGT GCTTATATTG CAGCTCTCTT CAGACACACC AGATCCTATT
  ACAGATGTGA ACTCAGAACC TCTGGAAGAG CAGTCAGTGC TCTTAACCGC CAAGCCATCT
  Y
  TCCAGCCCTA GTTTCCTATT TTTAAGCAGG TTTGCACCTC TGAAAATTTT GGTGCAGAGT
  TGTTCTTATG GGGTCTCCAT TACCTACCTG GCTGTTTTCT CTTCTCTGGT GTTCGCTGGG
  CTGTACAACC ATTATCGGCC ACTGGGTGGC GCTGAAGCGC CAGGCAAATT ATTTGCTGTG
  GTCAGGCCAT CATTTTGACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320958798	CHEV_3_127673857	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237365193					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127764588 () rs orientation: forward

Symbol	Name	Function Class
Gm35667	predicted gene, 35667	within coordinates
Gm65460	predicted gene, 65460	1820 bp upstream
Rr52	regulatory region 52	within coordinates
Rr584913	regulatory region 584913	35 bp proximal
Rr584914	regulatory region 584914	135 bp proximal