rs237429651 SNP Detail

Summary

• ID
  rs237429651
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106105647 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTCAAATT GTTCTTTGAT
  GGTTTCATAT TTCTTGCTAA GTGGATCCTC CAGTAAATTA GATGTGAGTG TCAGGATTTT
  ACCATTTTGA ATCTGAATGT TCAGCTGATT GTCTAAGTCC AGTACATGAC TCCTTAGCTC
  CCAGATCCAT TGACTATACA TGGTTTCCAG TTTGCTCATG GCTATGACCT CTTGGGTGTT
  Y
  CTGAAACTGA AAATGAAGTT TTCATTGACA AGAGCTTTCC ACAAATCTTG TACTCTGAAT
  TTAAAATCTG AGATTTTTAA GATCCTTCCC CTAGATTCCT TCTGGGCGTT TGAAAGAATT
  ACATTCCGTA GTTCCTGGAC ATTGTAGCTA TAGTGAGGAT TGGGAGGGGC CATTGGGGGA
  TTGCCATCCC AGAGGTGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322371919	CHEV_7_113649954	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237429651					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106105647 () rs orientation: forward

Symbol	Name	Function Class
Gm72977	predicted gene, 72977	within coordinates
Gvin-ps7	GTPase, very large interferon inducible, pseudogene 7	within coordinates
Tssr74129	transcription start site region 74129	1485 bp upstream
Tssr74130	transcription start site region 74130	1436 bp upstream
Tssr74131	transcription start site region 74131	1225 bp upstream
Tssr74132	transcription start site region 74132	1049 bp upstream
Tssr74133	transcription start site region 74133	392 bp upstream
Tssr74134	transcription start site region 74134	137 bp upstream
Tssr74135	transcription start site region 74135	57 bp upstream
Tssr74136	transcription start site region 74136	11 bp upstream
Tssr74137	transcription start site region 74137	44 bp downstream
Tssr74138	transcription start site region 74138	74 bp downstream
Tssr74139	transcription start site region 74139	108 bp downstream
Tssr74140	transcription start site region 74140	163 bp downstream
Tssr74141	transcription start site region 74141	563 bp downstream
Tssr74142	transcription start site region 74142	706 bp downstream