rs237461821 SNP Detail

Summary

• ID
  rs237461821
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:43518845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGA GAAAAGAGAA GAGCAAAGTG
  G
  TGAGAGAAGA GTGACAGCAG GCTGA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321098299	CHEV_4_43531717	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237461821					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:43518845 () rs orientation: forward

Symbol	Name	Function Class
Rr398232	regulatory region 398232	1158 bp upstream
Tpm2	tropomyosin 2, beta	within coordinates
Tssr36976	transcription start site region 36976	404 bp downstream
Tssr36977	transcription start site region 36977	391 bp upstream
Tssr36978	transcription start site region 36978	563 bp upstream
Tssr41432	transcription start site region 41432	390 bp upstream
Tssr41433	transcription start site region 41433	372 bp upstream
Tssr41434	transcription start site region 41434	141 bp upstream
Tssr41435	transcription start site region 41435	410 bp downstream
Tssr41436	transcription start site region 41436	816 bp downstream
Tssr41437	transcription start site region 41437	1200 bp downstream