rs237589630 SNP Detail

Summary

• ID
  rs237589630
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:150871453 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttccctagt ttcattttaa tagtttctat
  actatgtctt tatgttctct tagtctattc cttactgtgt aatacaccag tggttcctct
  catgtaattt catcatgaat gttacagttt ccatttgtct ccaggagtgc aatttgaatc
  M
  ttttaaaaac tttgttgtct cactttgaat ctataaccac actaattcag gtacagtagt
  tggtgatctc ttggtaatct gtctcagtac ttgggttgct gtagaggaat tttgatctag
  caacatggct gcactggcaa gggatcacat                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320053003	CHEV_1_152842832	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237589630					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:150871453 () rs orientation: forward

Symbol	Name	Function Class
Cpgi846	CpG island 846	1909 bp distal
Gm29188	predicted gene 29188	within coordinates
Rr420194	regulatory region 420194	1822 bp distal
Rr420195	regulatory region 420195	1708 bp distal
Rr420196	regulatory region 420196	666 bp distal