rs237594474 SNP Detail

Summary

• ID
  rs237594474
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121067712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTCAAAA CACTAATCTT
  TAAAAGCCTG CCGGGATTGA TGGCCCCCTC ACCGCCCAAA TAGATCAATT CTAGACTTTT
  ATTTAATGAG ACAGCCAGGG AGAAATCACT ACTTCCCATC ACCGATAGAT GGTCCGATCT
  GCCTTTCAAT CAAGCACATT TCAAATGTAT TCATAGAATA CGTTTCACAC CTCCTCTGTC
  R
  TGTTTATTAT GCTTCTGGTT CTGCGCTGTT GCAAATGCAT AGCTGAAGCT GGCTCTGCTG
  TAAACTGTCT TAAAATAACA AAATTCTGAG ACCAGATCAA TGCTTTGTTG GGCCCTGTGT
  GTGTCCATTT AACAAAAAGT CACTTTGTGC AGAAATGACT CACTCTTGTA CTGTTCTTCT
  GGCTAGGATA GGCTGGGCGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324851438	CHEV_14_121229522	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237594474					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121067712 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	1622 bp proximal
Rr287001	regulatory region 287001	1512 bp distal
Rr287002	regulatory region 287002	712 bp distal
Rr287003	regulatory region 287003	1289 bp proximal
Rr390218	regulatory region 390218	1762 bp upstream
Rr404289	regulatory region 404289	1500 bp upstream