rs237614272 SNP Detail

Summary

• ID
  rs237614272
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:130275063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTTTGCGG TGACTGGCTT CTTTTTAGTT
  AAGCTACAAG AATTTGATTC TCCTATCTAC ACCACAAGGA CAGGCAGGCA GGCAGAACCA
  TCTCGTGTTA ATGACGTCTT CTGAGTACAA ACATAACTGC TGCTGCTGCT GGTCTATGAA
  M
  CTTGTTTAGT ATAGGTCTGA GGTCTGTCAG GTCCTTGTGT AGGAGTTTCC TATCATCTCG
  GAAGACAGCA CGTTACACCT TCTTGTAGGG CAGGTTCTTT GCAGAGAGTA AGTCCTAGCC
  ATTGAATGTT GATATATGCC AGTTTTGCTT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321317895	CHEV_4_130058517	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237614272					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:130275063 () rs orientation: forward

Symbol	Name	Function Class
2900017G11Rik	RIKEN cDNA 2900017G11 gene	485 bp downstream
Rr600533	regulatory region 600533	649 bp distal
Snrnp40	small nuclear ribonucleoprotein 40 (U5)	Intron