rs237651033 SNP Detail

Summary

• ID
  rs237651033
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128048550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTTTTTT TTTTGTTGTT TTTGttttgt
  ttttttcgag acagggtttc tctgtatatc agttttttat tattatagtt tgagacaggg
  tctcaaggat cggcctgcct cagcccgcgg agtgctggga ttaacaacat gACTTGTGCT
  Y
  attattatta ttattgttat tattattatt attattatta ttattattat tattattatt
  attattatta ttttcgagac agggtttctc tgtgaagtcc tggctgtcct ggaactcact
  ctgtagaccg ggctggcctc gaactcagaa                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323532328	CHEV_10_127649737	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237651033					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128048550 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2387	CpG island 2387	627 bp distal
Cpgi2388	CpG island 2388	398 bp proximal
Rr224447	regulatory region 224447	349 bp distal
Rr224448	regulatory region 224448	50 bp proximal
Rr402345	regulatory region 402345	670 bp downstream
Rr402346	regulatory region 402346	123 bp upstream
Spryd4	SPRY domain containing 4	887 bp upstream
Tssr99849	transcription start site region 99849	906 bp upstream
Tssr99850	transcription start site region 99850	858 bp upstream