rs237679035 SNP Detail

Summary

• ID
  rs237679035
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55251851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTAGTTCCC AAATAGGTAG
  AAACTAGAAT GTTTCACCCA GAATTCAAGA TAGAAAAAGG ATTACTCTTT TTTGCTTAAA
  AAAAAAAAAC AAAAAACAAA AAACAAAAAA ACAATCACTT TTATGTATGC CTATGTCTGT
  ATATAGGGAA GTCAGAAGGA ACTAAAATTC CCCTGGGGCT GGAGTTAAAG GTAGTTGTGA
  A
  CTGTCTTGTC TGGGTGCTGG GAATGGAACG TTGGTCATCT GCAAGAATAA TATGTGCTCT
  TGGCCACTGA CTGAGCCATC GCTCCAGCCC CGTTTTCATT TTGTTTATTG AGATGGGATC
  TCACAATGTA GACCAGACTG GCTTGAAACT CATGGAGCTC TGCTTGTCTC TTGACTAAAG
  AGATCTGGGA TTAAAGGCCA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324641563	CHEV_14_55633231	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237679035					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55251851 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6482	CpG island 6482	240 bp proximal
Gm63342	predicted gene, 63342	1180 bp downstream
Gm63347	predicted gene, 63347	within coordinates
Ngdn	neuroguidin, EIF4E binding protein	1060 bp upstream
Rr369830	regulatory region 369830	691 bp upstream
Rr369831	regulatory region 369831	910 bp upstream
Rr404108	regulatory region 404108	within coordinates
Rr492392	regulatory region 492392	570 bp proximal
Rr492393	regulatory region 492393	752 bp proximal
Rr492394	regulatory region 492394	1071 bp proximal
Rr492395	regulatory region 492395	1397 bp proximal
Rr492396	regulatory region 492396	1764 bp proximal
Tssr125743	transcription start site region 125743	1136 bp upstream