rs237735450 SNP Detail

Summary

• ID
  rs237735450
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44466186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCTCCGCG CCCCGCCCTC GCGCGGCCCC GACGGGGCGG
  TGGCGACCCC GGGCCCGCCA TGTCGCCCTG ACCCTCCACT CTCTGCTTCA GGCTGGGGGC
  S
  CGGGCTCGGT CTCCTGAATC GGTCAGATCC GATGTGTCTT TCACACCCGA AACCAGCTCG
  TCTCGTTCTC TCTCCCTGCT TCACGAATTT GCCACCCGA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322199702	CHEV_7_52072132	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237735450					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44466186 () rs orientation: forward

Symbol	Name	Function Class
Atf5	activating transcription factor 5	104 bp upstream
Cpgi18994	CpG island 18994	within coordinates
Il4i1b	interleukin 4 induced 1B	within coordinates
Nup62	nucleoporin 62	within coordinates
Rr400297	regulatory region 400297	689 bp downstream
Tssr66426	transcription start site region 66426	822 bp downstream
Tssr66427	transcription start site region 66427	454 bp downstream
Tssr66428	transcription start site region 66428	428 bp downstream
Tssr66429	transcription start site region 66429	387 bp downstream
Tssr66430	transcription start site region 66430	356 bp downstream
Tssr72230	transcription start site region 72230	1105 bp upstream
Tssr72231	transcription start site region 72231	1080 bp upstream
Tssr72232	transcription start site region 72232	836 bp upstream
Tssr72233	transcription start site region 72233	154 bp upstream
Tssr72234	transcription start site region 72234	192 bp downstream