rs237735857 SNP Detail

Summary

• ID
  rs237735857
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112640236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCC TCTCCCGCGA CCTGGCCCCG
  Y
  GGAGCGGCCA CCCAAGGTCA CGCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324170080	CHEV_12_113912013	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237735857					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112640236 () rs orientation: forward

Symbol	Name	Function Class
Akt1	thymoma viral proto-oncogene 1	within coordinates
Cpgi5173	CpG island 5173	within coordinates
Gm30150	predicted gene, 30150	686 bp upstream
Rr369631	regulatory region 369631	1628 bp upstream
Tssr115391	transcription start site region 115391	610 bp upstream
Tssr117876	transcription start site region 117876	1758 bp upstream
Tssr117877	transcription start site region 117877	214 bp downstream
Tssr117878	transcription start site region 117878	273 bp downstream
Tssr117879	transcription start site region 117879	391 bp downstream
Tssr117880	transcription start site region 117880	541 bp downstream
Tssr117881	transcription start site region 117881	572 bp downstream
Tssr117882	transcription start site region 117882	951 bp downstream
Tssr117883	transcription start site region 117883	972 bp downstream
Tssr117884	transcription start site region 117884	1024 bp downstream