rs237775234 SNP Detail

Summary

• ID
  rs237775234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7291012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAATTAG CAACAAATGG
  TTAGCAGTGA ATGTAATTGT CTGACTCTAT GATTACTACT CAGAAAAGTT AAATAACTCA
  TGTACTTTAA AAAAGAAATT GAAAGGGAAA AGGATGGACC TGGACATTGT TTTGTTAAGT
  GAGGTGATCC AGATTCAGAA AGGAAGAGGC AGGCGGATTT CTGAGTTCAA AGCCAGCTTG
  R
  TCTACAGAGC AAGTTCCAGG AAGTCAGCCA AGCAGAGAAA CCCTGTCTCG GGGAGAAAAA
  AGAAGAGAAA GAAAAGAAGA CAGGCAGGCA GGCAGGCGGG CAGTGAAATA CTGGATGTTC
  TCTCTCATGT ACAGATGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  GTTGTGTGAT ATGAAACTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325887812	CHEV_X_7001899	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237775234					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7291012 () rs orientation: forward

Symbol	Name	Function Class
2010204K13Rik	RIKEN cDNA 2010204K13 gene	1785 bp upstream
Cpgi22567	CpG island 22567	1893 bp distal
DXImx8	DNA segment, Chr X, Immunex 8	36 bp proximal
Tssr162787	transcription start site region 162787	1832 bp upstream
Tssr162788	transcription start site region 162788	1799 bp upstream
Tssr162789	transcription start site region 162789	1777 bp upstream