rs237775987 SNP Detail

Summary

• ID
  rs237775987
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:176538175 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGTGGAG AAAGAGTGAG
  GAAGCCCATC ATATTGGGGG AGGGGATGCC AAAGTGTTAA GGAAAACATG CTGAGAAGAA
  AATCAGAAGA GAAGGAAACA TTACAGGAAA GTAGGCAAAG TTAATGCCCA ACACTAGGAT
  AAAAGTTGTC AGTAGTCTGA AATTCAAATG TAAGCAGGCA TCCTGTGTTG TTCACCCAGG
  Y
  TAACAACCTG CAGAGACCCC TCTCTGGGTA CACCTTCAAG CCCTGTCCTG TTCCTTCCCA
  GCACTGTCCT GGAGAGGGAC TGAGAAGGCA GTGTTACGCA AACAGTCATC TAAAAGGGAG
  ATGATTTCTG TCACCGTTTG AAACAAGCTT AGGGTTATTG TTTCCACTCC AACCTGCAAT
  TGGTGCTCCT GTTCATTATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320157471	CHEV_1_178640740	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237775987					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:176538175 () rs orientation: forward

Symbol	Name	Function Class
Rr396622	regulatory region 396622	1956 bp upstream
Rr423899	regulatory region 423899	1878 bp proximal
Rr423900	regulatory region 423900	1967 bp proximal