rs237780172 SNP Detail

Summary

• ID
  rs237780172
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101206209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCCTTTAC AGTTCCATCA
  GTTTTCCTGC AAATTTCATT TTTTCCTTTA CCTTAGTAGT TTAAAACTGT GTCTGTGAAT
  GTATGTGTGG GTGTGTGCAT GCATGCAGGT GCCCTCGGAG GCCAGATGAC CCCCTGAAGT
  TATAGGTGGT TACAACATGG GTGTTGGGGA CTGAATTTGG GTCCTCTGCA AAAGCAGTAT
  R
  TGTATTTAAC TGTTGAGCTA TCTCTCCTGC CTCATAATTC CATTTTTTCT CAACAGCTGA
  TTAAAATTCC ACTGTGTGTG CATGCCACAT TTTTATTATC CATTCATCTG TTGATGGGCA
  TTTAGGCTGG CTCCATTTTC TTGCTATTGT AAATAGAGCA GCAATGAACA CGGATGTGCA
  AATATCACTG TGGTAGGTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323149610	CHEV_9_101231340	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237780172					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101206209 () rs orientation: forward

Symbol	Name	Function Class
Rr198413	regulatory region 198413	within coordinates
Rr206996	regulatory region 206996	1610 bp distal