rs237817024 SNP Detail

Summary

• ID
  rs237817024
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84510413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCCAACTC TAACAGGAAA CAGCAAATTC
  ATCTTTTTTC TTTTTCTAAA CCACTCTGCT GGAGACAAGT CCCTTGAGTC AGAGCTCTTT
  AAGGCGCACT TCCTTTACAT GGGTCAAACT GAAGCCACCG GTTTGTGAGT CCCCAAAGGA
  R
  TCACTGGAGG ACAACAGGAG CATTTTCAGA TACCTTTCAG GGCAGACCTG CCCTGGCTGT
  ACCCCCTATC TTGAAGAAAA AGAAAAACGA ATAAGGTGAA AATCGCAACT ACTATTTATA
  GAATCAAAAT GGGTTCATCC ATTGAGTTTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325261441	CHEV_16_84713770	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs237817024					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84510413 () rs orientation: forward

Symbol	Name	Function Class
Mir155	microRNA 155	615 bp upstream
Mir155hg	Mir155 host gene (non-protein coding)	within coordinates
Rr404941	regulatory region 404941	190 bp downstream
Rr518521	regulatory region 518521	within coordinates
Rr518522	regulatory region 518522	224 bp proximal
Tssr139172	transcription start site region 139172	1665 bp downstream
Tssr139173	transcription start site region 139173	677 bp upstream
Tssr139174	transcription start site region 139174	1460 bp upstream
Tssr139175	transcription start site region 139175	1548 bp upstream